PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC046982.20
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 109aa    MW: 12761.7 Da    PI: 8.6451
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC046982.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.15.6e-1225992198
                  HH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
            B3 21 kfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                  +fa++h +++k +++t +    s rs  vkl+   +  ++++++GW  F+++ +L++g +++F+l++r++  ++v++f+
  EcC046982.20 25 QFARQHiQENK-KERTFR---YSDRSRPVKLSRYTREIQVFFSAGWPAFARETHLCVGNVCMFELIDRDDIVFKVSIFS 99
                  68888853332.333455...466999999944455555***************************9999989999997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.1E-1225100IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.75E-1025100IPR015300DNA-binding pseudobarrel domain
PfamPF023628.4E-925100IPR003340B3 DNA binding domain
CDDcd100171.11E-82599No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    Send to blast
MFHFVCYAIS IIVELYSRMG GGQCQFARQH IQENKKERTF RYSDRSRPVK LSRYTREIQV  60
FFSAGWPAFA RETHLCVGNV CMFELIDRDD IVFKVSIFSS GGKDQIHID
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065666.16e-44PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X6
TrEMBLA0A059BAW79e-43A0A059BAW7_EUCGR; Uncharacterized protein